Templates
What is a Template?Input (Registered Sample List) *, nucleic acid extraction (String) *, sample volume or weight for DNA extraction (String) , Extract Name (String) *
Input (Registered Sample List) *, Protocol Assay 4 (String) *, Assay 4 parameter value 1 (String) *, Assay 4 parameter value 2 (Controlled Vocabulary - Assay 4 parameter value 2) , Assay 4 parameter value 3 (Controlled Vocabulary - Assay 4 parameter value 3) , data file 1 (String) *, comment 1 (String) *, comment 2 (Controlled Vocabulary - comment 2) , comment 3 (Controlled Vocabulary - comment 3)
Input (Registered Sample List) *, Protocol Assay 5 (String) *, Assay 5 parameter value 1 (String) *, Assay 5 parameter value 2 (Controlled Vocabulary - Assay 5 parameter value 2) , Assay 5 parameter value 3 (Controlled Vocabulary - Assay 5 parameter value 3) , data file 2 (String) *, comment 1 (String) *, comment 2 (Controlled Vocabulary - comment 2) , comment 3 (Controlled Vocabulary - comment 3)
Input (Registered Sample List) *, nucleic acid sequencing (String) *, sequencing instrument (Controlled Vocabulary - sequencing instrument) *, file type (Controlled Vocabulary - file type) *, file checksum (String) , Raw Data File (String) *, submission date (String) , status (Controlled Vocabulary - status) , accession (String)
Input (Registered Sample List) *, sequence assembly (String) *, Normalization Name (String) , Data Transformation Name (String) , Derived Data File (String)
Input (Registered Sample List) *, sample collection (String) *, Sample Name (String) *
Source Name (String) *, Title (String) *, Description (String) *, tax_id (String) *, organism (String) , cell_type (String) , dev_stage (String) , germline (String) , tissue_lib (String) , tissue_type (String) , collection_date (String) , isolation_source (String) , lat_lon (String) , collected_by (String) , geographic location (country and/or sea) (Controlled Vocabulary - geographic location (country and/or sea)) , geographic location (region and locality) (String) , identified_by (String) , environmental_sample (Controlled Vocabulary - environmental_sample) , mating_type (String) , sex (String) , lab_host (String) , host scientific name (String) , bio_material (String) , culture_collection (String) , specimen_voucher (String) , cultivar (String) , ecotype (String) , isolate (String) , sub_species (String) , variety (String) , sub_strain (String) , cell_line (String) , serotype (String) , serovar (String) , strain (String) , submission date (String) , status (Controlled Vocabulary - status) , accession (String)