Experiment Sample Templates
What is an Experiment Sample Template?Filters
Source Name (String) *, geographic location (country and/or sea) (Controlled Vocabulary - geographic location (country and/or sea)) *, taxon_id (Integer) *
Input (Registered Sample List) *, nucleic acid sequencing (String) *, sequencing instrument (Controlled Vocabulary - sequencing instrument) *, quality scorer (String) , base caller (String) , Assay Name (String) *, Technology type (Controlled Vocabulary - Technology type) *, Raw Data File (String) *
Input (Registered Sample List) *, Protocol Assay 1 (String) *, Assay 1 parameter value 1 (String) *, Assay 1 parameter value 2 (Controlled Vocabulary - Assay 1 parameter value 2) , Assay 1 parameter value 3 (Controlled Vocabulary - Assay 1 parameter value 3) , other material 1 (String) *, other material characteristic 1 (String) *, other material characteristic 2 (Controlled Vocabulary - other material characteristic 2) , other material characteristic 3 (Controlled Vocabulary - other material characteristic 3)
Input (Registered Sample List) *, Protocol Assay 2 (String) *, Assay 2 parameter value 1 (String) *, Assay 2 parameter value 2 (Controlled Vocabulary - Assay 2 parameter value 2) , Assay 2 parameter value 3 (Controlled Vocabulary - Assay 2 parameter value 3) , other material 2 (String) *, other material 2 characteristic 1 (String) *, other material 2 characteristic 2 (Controlled Vocabulary - other material 2 characteristic 2) , other material 2 characteristic 3 (Controlled Vocabulary - other material 2 characteristic 3)
Input (Registered Sample List) *, Protocol Assay 3 (String) *, Assay 3 parameter value 1 (String) *, Assay 3 parameter value 2 (Controlled Vocabulary - Assay 3 parameter value 2) , Assay 3 parameter value 3 (Controlled Vocabulary - Assay 3 parameter value 3) , other material 3 (String) *, other material 3 characteristic 1 (String) *, other material 3 characteristic 2 (Controlled Vocabulary - other material 3 characteristic 2) , other material 3 characteristic 3 (Controlled Vocabulary - other material 3 characteristic 3)
Input (Registered Sample List) *, library construction (String) *, library source (Controlled Vocabulary - library source) *, library strategy (Controlled Vocabulary - library strategy) *, library selection (Controlled Vocabulary - library selection) *, library layout (Controlled Vocabulary - library layout) *, library strand (Controlled Vocabulary - library strand) , orientation (Controlled Vocabulary - orientation) , library name (String) *
Input (Registered Sample List) *, nucleic acid extraction (String) *, sample volume or weight for DNA extraction (String) , Extract Name (String) *, Material type (Controlled Vocabulary - Material type) *