nucleic acid sequencing
View Samples
SEEK ID: https://datahub-test.elixir-belgium.org/templates/15
Submitter: System
Projects: Default Project
Version: 1.3.0
Group: ena
7 Sample types are referencing this Experiment Sample Template
ISA Level: assay - data file
Organism: any
Parent Template: None
Child Templates:Attributes
| Name | Type | Description | PID  | ISA Tag | Unit |
|---|---|---|---|---|---|
| Input* | Registered Sample List - /templates/15 | Existing Samples in DataHub that represent input for this protocol. | - | - | - |
| nucleic acid sequencing* | String | type of assay or experimental step performed. | - | protocol | - |
| sequencing instrument* | Controlled Vocabulary - sequencing instrument | a parameter to report the sequencing instrument model and make | - | parameter_value | - |
| file type* | Controlled Vocabulary - file type | The run data file model. | - | data_file_comment | - |
| file checksum | String | The MD5 checksum of the file. | - | data_file_comment | - |
| Raw Data File* | String | Name (or URI) of the raw data file generated by an assay. | - | data_file | - |
| submission date | String | Date in which run was submitted to ENA.Date of submission to ENA. | - | data_file_comment | - |
| status | Controlled Vocabulary - status | Status of submission to ENA. | - | data_file_comment | - |
| accession | String | ENA run accession code. Provided by ENA after submission. | - | data_file_comment | - |
Related items
Programme: This Project is not associated with a Programme
Public web page: Not specified
Input (library name) (Registered Sample List) *, nucleic acid sequencing (String) *, sequencing instrument (Controlled Vocabulary - sequencing instrument (free text allowed)) *, file type (Controlled Vocabulary - file type (free text allowed)) *, file checksum (String) , Raw Data File (String) *, submission date (String) , status (Controlled Vocabulary - status (free text allowed)) , accession (String)
Not specified
DownloadInput (library name) (Registered Sample List) *, nucleic acid sequencing (String) *, sequencing instrument (Controlled Vocabulary - sequencing instrument (free text allowed)) *, file type (Controlled Vocabulary - file type (free text allowed)) *, file checksum (String) , Raw Data File (String) *, submission date (String) , status (Controlled Vocabulary - status (free text allowed)) , accession (String)
Not specified
Input (library name) (Registered Sample List) *, nucleic acid sequencing (String) *, sequencing instrument (Controlled Vocabulary - sequencing instrument (free text allowed)) *, file type (Controlled Vocabulary - file type (free text allowed)) *, file checksum (String) , Raw Data File (String) *, submission date (String) , status (Controlled Vocabulary - status (free text allowed)) , accession (String)
Not specified
Input (Registered Sample List) *, nucleic acid sequencing (String) *, sequencing instrument (Controlled Vocabulary - sequencing instrument (free text allowed)) *, file type (Controlled Vocabulary - file type (free text allowed)) *, file checksum (String) , Raw Data File (String) *, submission date (String) , status (Controlled Vocabulary - status (free text allowed)) , accession (String)
Not specified
