library construction
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SEEK ID: https://datahub-test.elixir-belgium.org/templates/13
Submitter: System
Projects: Default Project
Version: 1.3.0
Group: ena
9 Sample types are referencing this Template
ISA Level: assay - material
Organism: any
Parent Template: None
Child Templates:Attributes
| Name | Type | Description | PID  | ISA Tag | Unit |
|---|---|---|---|---|---|
| Input* | Registered Sample List | Existing Samples in DataHub that represent input for this protocol. | - | - | - |
| library construction* | String | type of assay or experimental step performed. | - | protocol | - |
| library_construction_protocol | String | Free form text describing the protocol by which the sequencing library was constructed. | - | parameter_value | - |
| Title* | String | Short text that can be used to call out experiment records in searches or in displays. | - | other_material_characteristic | - |
| design_description* | String | The design of the library including details of how it was constructed. | - | parameter_value | - |
| library source* | Controlled Vocabulary - library source | The LIBRARY_SOURCE specifies the type of source material that is being sequenced. (SRA 1.2 documentation) | - | parameter_value | - |
| library strategy* | Controlled Vocabulary - library strategy | Sequencing technique intended for this library (SRA 1.2 documentation) | - | parameter_value | - |
| library selection* | Controlled Vocabulary - library selection | Whether any method was used to select for or against, enrich, or screen the material being sequenced. (SRA 1.2 documentation) | - | parameter_value | - |
| library layout | Controlled Vocabulary - library layout | specifies whether to expect single, paired, or other configuration of reads. In the case of paired reads, information about the relative distance and orientation is specified. | - | parameter_value | - |
| insert size | String | Insert size for paired reads. | - | parameter_value | - |
| library name* | String | Name given to the generated library | - | other_material | - |
| submission date | String | Date in which experiment was submitted to ENA. | - | other_material_characteristic | - |
| status | Controlled Vocabulary - status | Status of submission to ENA. | - | other_material_characteristic | - |
| accession | String | ENA experiment accession code. Provided by ENA after submission. | - | other_material_characteristic | - |
Creators and SubmitterCreators
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JERM
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Views: 149
Created: 18th Jul 2022 at 13:01
Last updated: 10th Nov 2023 at 10:31
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