Experiment Sample Templates
What is an Experiment Sample Template?Filters
Genome assembly
Input (Registered Sample List) *, sequence assembly protocol (String) *, FASTA (String) *, FASTA URL (String) , ASSEMBLYNAME (String) *, ASSEMBLY_TYPE (Controlled Vocabulary - ENA ASSEMBLY_TYPE) *, COVERAGE (String) *, PROGRAM (String) *, PLATFORM (String) *, MOLECULETYPE (String)
Test for MARS
Input (Registered Sample List) *, Analysis Title (String) *, Analysis Alias (String) *, Description (String) *, Experiment Type (Controlled Vocabulary - EVA Experiment Type CV) *, Reference (String) *, Data file Name (String) *
Input (Registered Sample List) *, Analysis overview (Text) *, Analysed datafile (String) *
Input (Registered Sample List) *, Protocol (String) *, Correlation output (String) *, Spatial and Temporal Alignment (String) *, Fiducidals used (Text) *, Transformation matrix (Text) *
Input (Registered Sample List) *, Protocol (String) *, Datafile Name (String) *, Datafile Link (URI) *, Imaging Method (Controlled Vocabulary - Biological Imaging Methods Onthology) *, Imaging Instrument (Text) *, Imaging Acquisition Parameters (Text) *
Input (Registered Sample List) *, Specimen Preparation (Text) *, Specimen Name (String) *
This study sample template for multi-omics research within the deCYPher project provides a structured format for researchers to enter sample-specific metadata in a manner that aligns with data repositories' requirements. The study sample describes how a sample was made by applying a protocol to the study source. By capturing details systematically, the template ensures metadata consistency, enhances discoverability, and facilitates data sharing in a way that supports FAIR data principles.
Input (Registered Sample List) *, Sample Collection (String) *, Sample Name (String) *, Title (String) *, Sample Description (String) *, Collection Data (ENA custom date) *, Accession (String) , Submission Date (String) , Status (Controlled Vocabulary - status)
