sequencing RNA
View samplesremoval of attributes
Template
Attributes
| Name | Type | Description | PID  | Unit |
|---|---|---|---|---|
| Input* | Registered Sample List | Existing Samples in DataHub that represent input for this protocol. | - | - |
| nucleic acid sequencing* | String | A protocol that describes the processes performed and equipment used to determine the order of nucleotide bases in a nucleic acid sample. | - | - |
| sequencing instrument* | Controlled Vocabulary - sequencing instrument (free text allowed) | a parameter to report the sequencing instrument model and make | - | - |
| Assay Name* | String | User-defined name for an assay. | - | - |
| Technology type* | Controlled Vocabulary - Technology type (free text allowed) | Not specified | - | - |
| Raw Data File* | String | or Array Data File: Name (or URI) of the raw data file generated by an assay. | - | - |
Tags
Not specifiedRelated items
Projects: Environmental stimuli on yeast, Mutant re-sequencing
Institutions: Default Institution
Projects: Environmental stimuli on yeast, Mutant re-sequencing
Web page: Not specified
Programme: Claire's research group
Public web page: Not specified
Characterization of Saccharomyces cerevisiae to heat stress conditions
Submitter: claire s
Studies: Study - transcriptomic response
Assays: Assay - Library preparation, Assay - RNA extraction, Assay - RNA sequencing
The sequencing was performed by the external provider
Submitter: David s
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Investigation - Heat stress
Input (Registered Sample List) *, nucleic acid sequencing (String) *, sequencing instrument (Controlled Vocabulary - sequencing instrument) *, quality scorer (String) , base caller (String) , Assay Name (String) *, Technology type (Controlled Vocabulary - Technology type) *, Raw Data File (String) *
