Basic (non-analytical) operations of some data, either a file or equivalent entity in memory, such that the same basic type of data is consumed as input and generated as output.
Ontology: https://www.ebi.ac.uk/ols4/ontologies/EDAM
Root URIs: http://edamontology.org/operation_2409
39 Terms
Label | Ontology URI | Parent URI |
---|---|---|
Deposition | http://edamontology.org/operation_3431 | http://edamontology.org/operation_2409 |
Aggregation | http://edamontology.org/operation_3436 | http://edamontology.org/operation_2409 |
Format detection | http://edamontology.org/operation_3357 | http://edamontology.org/operation_2409 |
Splitting | http://edamontology.org/operation_3359 | http://edamontology.org/operation_2409 |
Formatting | http://edamontology.org/operation_0335 | http://edamontology.org/operation_2409 |
Filtering | http://edamontology.org/operation_3695 | http://edamontology.org/operation_2409 |
Parsing | http://edamontology.org/operation_1812 | http://edamontology.org/operation_2409 |
Editing | http://edamontology.org/operation_3096 | http://edamontology.org/operation_2409 |
Phylogenetic tree editing | http://edamontology.org/operation_0326 | http://edamontology.org/operation_3096 |
Structure editing | http://edamontology.org/operation_3080 | http://edamontology.org/operation_3096 |
Sequence alignment editing | http://edamontology.org/operation_3081 | http://edamontology.org/operation_3096 |
Sequence alignment conversion | http://edamontology.org/operation_0260 | http://edamontology.org/operation_3081 |
Sequence editing | http://edamontology.org/operation_0231 | http://edamontology.org/operation_3096 |
Sequence file editing | http://edamontology.org/operation_2121 | http://edamontology.org/operation_0231 |
Restriction site creation | http://edamontology.org/operation_0370 | http://edamontology.org/operation_0231 |
Sequence mutation and randomisation | http://edamontology.org/operation_0367 | http://edamontology.org/operation_0231 |
Sequence cutting | http://edamontology.org/operation_0369 | http://edamontology.org/operation_0231 |
Primer removal | http://edamontology.org/operation_3237 | http://edamontology.org/operation_0369 |
Sequence trimming | http://edamontology.org/operation_3192 | http://edamontology.org/operation_0369 |
Sequence masking | http://edamontology.org/operation_0368 | http://edamontology.org/operation_0231 |
Sequence conversion | http://edamontology.org/operation_0233 | http://edamontology.org/operation_0231 |
DNA transcription | http://edamontology.org/operation_0372 | http://edamontology.org/operation_0233 |
DNA translation | http://edamontology.org/operation_0371 | http://edamontology.org/operation_0233 |
DNA back-translation | http://edamontology.org/operation_2510 | http://edamontology.org/operation_0233 |
Sequence merging | http://edamontology.org/operation_0232 | http://edamontology.org/operation_0231 |
Sorting | http://edamontology.org/operation_3802 | http://edamontology.org/operation_2409 |
Anonymisation | http://edamontology.org/operation_3283 | http://edamontology.org/operation_2409 |
Query and retrieval | http://edamontology.org/operation_0224 | http://edamontology.org/operation_2409 |
Database search | http://edamontology.org/operation_2421 | http://edamontology.org/operation_0224 |
Sequence database search | http://edamontology.org/operation_0338 | http://edamontology.org/operation_2421 |
Sequence database search (by property) | http://edamontology.org/operation_0349 | http://edamontology.org/operation_0338 |
Sequence similarity search | http://edamontology.org/operation_0346 | http://edamontology.org/operation_0338 |
Structure database search | http://edamontology.org/operation_0339 | http://edamontology.org/operation_2421 |
Structural similarity search | http://edamontology.org/operation_0360 | http://edamontology.org/operation_0339 |
Literature search | http://edamontology.org/operation_0305 | http://edamontology.org/operation_2421 |
Peptide database search | http://edamontology.org/operation_3646 | http://edamontology.org/operation_2421 |
Target-Decoy | http://edamontology.org/operation_3649 | http://edamontology.org/operation_3646 |
Blind peptide database search | http://edamontology.org/operation_3647 | http://edamontology.org/operation_3646 |
Data retrieval | http://edamontology.org/operation_2422 | http://edamontology.org/operation_0224 |