deCYPher experiments templates
Experiment View
OverviewTemplates to be used by wet-lab when performing an experiment for a WP or Task to describe experimental conditions in Study and Assays.
Programme: deCYPher
SEEK ID: https://datahub-test.elixir-belgium.org/projects/54
Public web page: Not specified
Organisms: No Organisms specified
Elixir Belgium PALs: No PALs for this Project
Project created: 11th Dec 2023
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Institutions: Default Institution, Vlaams Instituut voor Biotechnologie, uppsala University, ILVO
https://orcid.org/0000-0002-2827-6565
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Institutions: Ghent University, Vlaams Instituut voor Biotechnologie, VIB
Test
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Web page: https://www.decypher.bio/
ROR ID: https://ror.org/05sd8tv96
Department: Not specified
Country: 
Spain
City: Barcelona
Web page: https://www.bsc.es/
ROR ID: https://ror.org/02gfc7t72
Department: Not specified
Country: Spain
City: Madrid
Web page: https://www.csic.es
ROR ID: https://ror.org/00cv9y106
Department: Not specified
Country: 
Belgium
City: Ghent
Web page: https://www.ugent.be
ROR ID: Not specified
Department: Not specified
Country: 
France
City: Not specified
Web page: Not specified
Input (Registered Sample List) *, Analysis overview (Text) *, Analysed datafile (String) *
Input (Registered Sample List) *, Protocol (String) *, Correlation output (String) *, Spatial and Temporal Alignment (String) *, Fiducidals used (Text) *, Transformation matrix (Text) *
Input (Registered Sample List) *, Protocol (String) *, Datafile Name (String) *, Datafile Link (URI) *, Imaging Method (Controlled Vocabulary - Biological Imaging Methods Onthology) *, Imaging Instrument (Text) *, Imaging Acquisition Parameters (Text) *
Input (Registered Sample List) *, Specimen Preparation (Text) *, Specimen Name (String) *
This study sample template for multi-omics research within the deCYPher project provides a structured format for researchers to enter sample-specific metadata in a manner that aligns with data repositories' requirements. The study sample describes how a sample was made by applying a protocol to the study source. By capturing details systematically, the template ensures metadata consistency, enhances discoverability, and facilitates data sharing in a way that supports FAIR data principles.
Input (Registered Sample List) *, Sample Collection (String) *, Sample Name (String) *, Title (String) *, Sample Description (String) *, Collection Data (ENA custom date) *, Accession (String) , Submission Date (String) , Status (Controlled Vocabulary - status)
