SEEK ID: https://datahub-test.elixir-belgium.org/people/27
Location: Belgium
ORCID: Not specified
Joined: 13th Mar 2023
Expertise: Not specified
Tools: Not specified
Roles
Admin
Project administrator
- Kevin's Test project
- Project Test Permissions
- Test program seek-1.14
- Test Project 07-11-2023
- Test project seek-1.15
- ENA Upload tool
- Assessment of non-ribosomal protein synthetase accuracy of cyclic lipodepsipeptides
- WP1 - Learning techniques fit for industrial biotechnology
Programme administrator
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Related items
- Programmes (4)
- Projects (11)
- Institutions (2)
- Investigations (1+7)
- Studies (1+6)
- Assays (1+13)
- Sample types (3+26)
- Samples (0+50)
- Experiment Sample Templates (0+1)
Projects: Membrane interactions of cyclic lipodepsipeptides, Assessment of non-ribosomal protein synthetase accuracy of cyclic lipodepsipeptides, Synthesis of non-natural analogues of CLiPs, Project: Search when changing attribute name
Web page: Not specified
Test
Projects: WP2 - Bioprospecting and functional expression of CYPs, deCYPher Composable Elements, deCYPher experiments templates, WP1 - Learning techniques fit for industrial biotechnology, WP4 - Sustainable bio-based production of flavonoids and terpenoids, WP3 - MCFs for flavonoids and terpenoids
Web page: Not specified
Projects: Kevin's Test project, Project Test Permissions, Test program seek-1.14, Test Project 07-11-2023, Test project seek-1.15, ENA Upload tool
Web page: Not specified
This is the main page for spatial proteomics facility
Projects: CODEX on TMA from metastatic uveal melanoma biopsies, Maria’s genome project, Project April 17
Web page: Not specified
Programme: deCYPher
Public web page: Not specified
Organisms: Not specified
Programme: Kevin's Test Programme
Public web page: Not specified
Organisms: Not specified
Objectives: WP 2 main’s objective is to overcome the challenge to efficiently identify, select and functionally express CYPs in microbial hosts by: (i) Better understanding of the CYP structure/product specificity relationship (SO1.2/SO3.2) (ii) Correct localisation & functional expression of CYPs in different microbial hosts (SO1.3) (iii) Resolving stress relief caused by CYP expression in microbes (SO2.1).
Programme: deCYPher
Public web page: Not specified
Organisms: Not specified
Programme: Pseudomonas cyclic lipodepsipeptides (CLiPs)
Public web page: Not specified
Organisms: Not specified
Toy project for demonstrating the workflow to submit to ENA, using the ENA upload tool.
Programme: Kevin's Test Programme
Public web page: Not specified
Organisms: Not specified
Snapshots: No snapshots
Submitter: Kevin De Pelseneer
Investigation: Kevin's Test investigation in SP
Assays: Kevin's test assay
Snapshots: No snapshots
Submitter: Kevin De Pelseneer
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Kevin's Test investigation in SP
Study: Kevin's Test Study in SP
SOPs: No SOPs
Snapshots: No snapshots
Input (Sample Name) (Registered Sample List) *, nucleic acid extraction (String) *, Extract Name (String) *, Material type (Controlled Vocabulary - Material type (free text allowed)) *
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Source Name (String) *, Title (String) *, Description (String) *, tax_id (String) *, ploidy (Controlled Vocabulary - ploidy (free text allowed)) *, number of replicons (Integer) *, estimated size (Integer) *, collection date (String) *, geographic location (country and/or sea) (Controlled Vocabulary - geographic location (country and/or sea) (free text allowed)) *, geographic location (latitude) (String) *, geographic location (longitude) (String) *, geographic location (region and locality) (String) , identified_by (String) , geographic location (depth) (String) , environment (biome) (Controlled Vocabulary - environment (biome) (free text allowed)) , environment (feature) (String) , geographic location (elevation) (String) , source material identifiers (String) , isolation and growth condition (String) *, propagation (String) , plant structure (Controlled Vocabulary - plant structure (free text allowed)) *, plant developmental stage (Controlled Vocabulary - plant developmental stage (free text allowed)) *, sampled age (String) , sample phenotype (String) , sample health state (Controlled Vocabulary - sample health state (free text allowed)) , sample disease status (String) , sample disease stage (String) , sample wet mass (String) , sample dry mass (String) , sample height (String) , sample length (String) , growth facility (Controlled Vocabulary - growth facility (free text allowed)) , sample capture status (Controlled Vocabulary - sample capture status (free text allowed)) , genotype (String) , genetic modification (String) , organism common name (String) , subspecific genetic lineage rank (String) , subspecific genetic lineage name (String) , biological status (String) , organism phenotype (String) , ancestral data (String) , source material description (String) , biotic relationship (String) , growth habit (Controlled Vocabulary - growth habit (free text allowed)) , plant sex (String) , climate environment (String) , gaseous environment (String) , seasonal environment (String) , soil_taxonomic/FAO classification (String) , soil_taxonomic/local classification (String) , soil_taxonomic/local classification method (String) , soil type (Controlled Vocabulary - soil type (free text allowed)) , soil type method (String) , drainage classification (Controlled Vocabulary - drainage classification (free text allowed)) , texture (String) , texture method (String) , soil water content (String) , soil pH (String) , plant growth medium (String) *, rooting conditions (String) , culture rooting medium (String) , rooting medium macronutrients (String) , rooting medium micronutrients (String) , rooting medium organic supplements (String) , rooting medium carbon (String) , rooting medium regulators (String) , rooting medium solidifier (String) , rooting medium pH (String) , air temperature regimen (String) , antibiotic regimen (String) , chemical mutagen (String) , fertilizer regimen (String) , fungicide regimen (String) , gravity (String) , growth hormone regimen (String) , herbicide regimen (String) , humidity regimen (String) , mineral nutrient regimen (String) , non-mineral nutrient regimen (String) , pesticide regimen (String) , pH regimen (String) , radiation regimen (String) , rainfall regimen (String) , salt regimen (String) , standing water regimen (String) , watering regimen (String) , water temperature regimen (String) , plant treatment (String) , light regimen (String) , biotic regimen (String) , mechanical damage (String) , chemical administration (String) , perturbation (String) , submission date (String) , status (Controlled Vocabulary - status (free text allowed)) , accession (String)
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