Parul Tewatia
SEEK ID: https://datahub-test.elixir-belgium.org/people/17
Locations:
Not specified
, 
Sweden
ORCID: Not specified
Joined: 7th Sep 2022
Expertise: Not specified
Tools: Not specified
Roles
Project administrator
- Minimum metadata
- SBDI test case
- Spatial proteomics use case
- CODEX on TMA from metastatic uveal melanoma biopsies
Programme administrator
Their tagsRelated items
This is the main page for spatial proteomics facility
Projects: CODEX on TMA from metastatic uveal melanoma biopsies, Maria’s genome project, Project April 17
Web page: Not specified
Instance for collecting the test user scenarios in the DC/NBIS evaluation of DataHub
Projects: Wastewater test, Yvonne's user scenarios, S-test-project, Spatial proteomics use case, Crayfish scRNA-seq, The fungi project
Web page: Not specified
Programme: spatial proteomics facility
Public web page: Not specified
Spatial Proteomics National Facility at SciLifeLab
Programme: SciLifeLab User Scenarios
Public web page: Not specified
Start date: 17th Nov 2022
End date: 10th Dec 2022
This is test case for SBDI metadata and data
Programme: ENA submit test
Public web page: Not specified
This is where Yvonne will test out different user scenarios (/studies), and document questions that arises while doing so.
Programme: SciLifeLab User Scenarios
Public web page: Not specified
Adding assets typical of a support project where genome data (raw reads + assemblies) will be published in ENA.
Programme: Yvonne's test area
Public web page: Not specified
Country: Not specified
City: Not specified
Web page: Not specified
one investigation i.e. the unit can have several studies, studies are user scenarios
phenocycler use case 1 for sample coming in for testing at facilty
Submitter: Parul Tewatia
Investigation: pheno cycler reports
Raw files without any processing are level 1
Submitter: Parul Tewatia
Assay type: Experimental Assay Type
Technology type: Imaging
Investigation: pheno cycler reports
Study: phenocycler use case 1
tissue staining with different flourophores
Submitter: Parul Tewatia
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: 1 hidden item
Study: 1 hidden item
Input (Sample Name) (Registered Sample List) *, Protocol Assay 1 (String) *, Assay 1 parameter value 1 (String) *, Assay 1 parameter value 2 (Controlled Vocabulary - Assay 1 parameter value 2 (free text allowed)) , Assay 1 parameter value 3 (Controlled Vocabulary - Assay 1 parameter value 3 (free text allowed)) , other material 1 (String) *, other material characteristic 1 (String) *, other material characteristic 2 (Controlled Vocabulary - other material characteristic 2 (free text allowed)) , other material characteristic 3 (Controlled Vocabulary - other material characteristic 3 (free text allowed))
Not specified
Input (Registered Sample List) *, sample collection (String) *, Sample Name (String) *, title (String) *, sample_description (String) *, collection date (ENA custom date) *, accession (String) , submission_date (String) , status (Controlled Vocabulary - status)
