Characterizing the hi-per mutant line
SEEK ID: https://datahub-test.elixir-belgium.org/investigations/4
Projects: Mutant re-sequencing
Investigation position:
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Projects: Environmental stimuli on yeast, Mutant re-sequencing
Institutions: Default Institution
Projects: Environmental stimuli on yeast, Mutant re-sequencing
Web page: Not specified
Programme: Claire's research group
Public web page: Not specified
Organisms: Not specified
In this Study we are re-sequencing a mutant line from our group to identify potential off target mutations.
Submitter: David s
Investigation: Investigation - hi-per characterization
Assays: Assay - DNA extraction, Assay - Library preparation, Assay - Sequencing
Snapshots: No snapshots
This assay performs the DNA extraction
Submitter: David s
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Investigation - hi-per characterization
Study: Study - Mutant re-sequencing
SOPs: DNA extraction
Snapshots: No snapshots
The assay design is based on ENA's requirements
Submitter: David s
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Investigation - hi-per characterization
Study: Study - Mutant re-sequencing
SOPs: Library preparation
Snapshots: No snapshots
This assay follows the standard design for whole genome sequencing at the Institute. Samples were sent to the sequencing facility.
Submitter: David s
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Investigation - hi-per characterization
Study: Study - Mutant re-sequencing
SOPs: DNA sequencing
Snapshots: No snapshots
The protocol that describes the DNA sequencing procedures
Investigations: Investigation - hi-per characterization
Studies: Study - Mutant re-sequencing
Assays: Assay - Sequencing
A protocol describing the library preparation step
Investigations: Investigation - hi-per characterization and 1 hidden item
Studies: Study - Mutant re-sequencing and 1 hidden item
Assays: Assay - Library preparation and 1 hidden item
A protocol describing the DNA extraction step
Investigations: Investigation - hi-per characterization and 2 hidden items
Studies: Study - Mutant re-sequencing and 2 hidden items
Assays: Assay - DNA extraction and 2 hidden items