Genome Assembly
Experiment ViewGenome Assembly
SEEK ID: https://datahub-test.elixir-belgium.org/assays/226
Experimental assay
Projects: Genetic properties of the MAGIC maize population
Investigation: Characterisation of founders lines
Study: Genome-seq_RNAseq_variants
Assay position: 2
Organisms: No organisms
Is ISA-JSON compliant: true
- Genome assembly 1.0.0 (id: 77)
Assay Stream: Genomic
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Creators and SubmitterViews: 144
Created: 15th Sep 2025 at 13:06
Last updated: 18th Sep 2025 at 09:59
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Projects: ISA ENA export, testing template created by user in SP, Second project, Genetic properties of the MAGIC maize population, CODEX on TMA from metastatic uveal melanoma biopsies, Test project seek-1.15, WP2 - Bioprospecting and functional expression of CYPs, WP1 - Learning techniques fit for industrial biotechnology, deCYPher Composable Elements, deCYPher experiments templates
Institutions: Default Institution, Vlaams Instituut voor Biotechnologie, uppsala University, ILVO
Data from Genetic properties of the MAGIC maize population: a new platform for high definition QTL mapping in Zea mays https://doi.org/10.1186/s13059-015-0716-z
Projects: Genetic properties of the MAGIC maize population
Web page: Not specified
Test for MARS
Programme: Multi-modal plant project test
Public web page: Not specified
WGS, RNAsequencing and genotyping of founders lines
Genome-seq_RNAseq_variants of founders lines
Submitter: Flora D'Anna
Investigation: Characterisation of founders lines
Assays: Genome Assembly, Genome Variants, Genome sequencing, Genomic, Genomic variants, Genomic variants, Library preparation, Library preparation, RNA extraction, RNA sequencing, Transcriptomics
Genome assembly
Input (Raw Data File) (Registered Sample List) *, sequence assembly protocol (String) *, FASTA (String) *, FASTA URL (String) , ASSEMBLYNAME (String) *, ASSEMBLY_TYPE (Controlled Vocabulary - ENA ASSEMBLY_TYPE) *, COVERAGE (String) *, PROGRAM (String) *, PLATFORM (String) *, MOLECULETYPE (String)
Not specified
Warning: A Protocol is missing. Associate a Protocol before exporting ISA.
